Protein ZmMYB40
ZmMYB40 is a protein in the MYB family.
Information
TF Name: ZmMYB40
Species: Maize
TF Family: MYB
Gene Name(Synonym): MYB40
Uniprot ID: Q84U76
Subgenome: 1

Protein ZmMYB40

ZmMYB40 is a protein in the MYB family.

Overview of domains present in v5 transcripts
PF00249PF13921
Zm00001eb130260_T001
Zm00001eb130260_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d040621DAPseq no logo sequence fimo position
Zm00001d040621DAPseq no logo sequence fimo position
Zm00001d040621ChIPseq no logo sequence fimo position
Zm00001d040621PChIPseq no logo sequence fimo position

Interactions where ZmMYB40 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMYB40 is the target  
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There are 202 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb130260_T001 from maize genome v5

Amino Acid Sequence
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MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNSFILLSSPRRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAA
AKEKKAKEKDDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLAL
SEEMVSALLAPESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLV
WDYDETLVTEPEGGEEGHQQQDDVMSDLFFLDNL

MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNSFILLSSPRRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAA
AKEKKAKEKDDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLAL
SEEMVSALLAPESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLV
WDYDETLVTEPEGGEEGHQQQDDVMSDLFFLDNL

MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNSFILLSSPRRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAA
AKEKKAKEKDDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLAL
SEEMVSALLAPESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLV
WDYDETLVTEPEGGEEGHQQQDDVMSDLFFLDNL

MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNSFILLSSPRRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAA
AKEKKAKEKDDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLAL
SEEMVSALLAPESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLV
WDYDETLVTEPEGGEEGHQQQDDVMSDLFFLDNL

MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNSFILLSSPRRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAA
AKEKKAKEKDDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLAL
SEEMVSALLAPESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLV
WDYDETLVTEPEGGEEGHQQQDDVMSDLFFLDNL

MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNSFILLSSPRRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAA
AKEKKAKEKDDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLAL
SEEMVSALLAPESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLV
WDYDETLVTEPEGGEEGHQQQDDVMSDLFFLDNL

MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNSFILLSSPRRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAA
AKEKKAKEKDDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLAL
SEEMVSALLAPESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLV
WDYDETLVTEPEGGEEGHQQQDDVMSDLFFLDNL

MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNSFILLSSPRRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAA
AKEKKAKEKDDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLAL
SEEMVSALLAPESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLV
WDYDETLVTEPEGGEEGHQQQDDVMSDLFFLDNL

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00249
PF13921
PF00249
PF13921
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Nucleotide Sequence
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GGCGACGAAAACCCCTCCAATTACG...

GRMZM2G051256_T01 from maize genome v3


Related TFome: pUT1749

Amino Acid Sequence
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MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAAAKEKKAKEK
DDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLALSEEMVSALL
APESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLVWDYDETLVT
EPEGGEEGHQQQDDVMSDLFFLDNL

Nucleotide Sequence
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CACGGACGACACCAGCAGCAGAGCC...

GRMZM2G051256_T02 from maize genome v3

Amino Acid Sequence
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RTTPAAEPRAIPSRPFHFSDPASQPAIPLRTAFLAVAELAAVVSSPSSCLLLARSPLPSSEKRMGRAPCCEKVGLKKGRW
TKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIKLHATLGNSFILLSSPR

Nucleotide Sequence
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CACGGACGACACCAGCAGCAGAGCC...

Zm00001d040621_T001 from maize genome v4

Amino Acid Sequence
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MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAAAKEKKAKEK
DDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLALSEEMVSALL
APESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLVWDYDETLVT
EPEGGEEGHQQQDDVMSDLFFLDNL

Nucleotide Sequence
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ACGGCACGGACGACACCAGCAGCAG...

Zm00001d040621_T002 from maize genome v4

Amino Acid Sequence
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MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGGLRLVLLAGLLRCGKSCRLRWINYLRAGLKRGNIS
EEEEDMIIKLHATLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAA
AKEKKAKEKDDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLAL
SEEMVSALLAPESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLV
WDYDETLVTEPEGGEEGHQQQDDVMSDLFFLDNL

Nucleotide Sequence
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ACGGCACGGACGACACCAGCAGCAG...

Zm00001eb130260_T002 from maize genome v5

Amino Acid Sequence
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MGRAPCCEKVGLKKGRWTKEEDEVLARYIKEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRAGLKRGNISEEEEDMIIK
LHATLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRRAADFRDGVVVDIDLSKLPGGGKRRGGRASRGAVVAAAKEKKAKEK
DDRGNSKVAEAEQQLRDTEDDDGGSVSTPRPQSDDCGTAQSEEEQAQASASGLTSDGHGPEEEEEEDPLALSEEMVSALL
APESPKLEVGPDGSCMDSYSGPPSGESGCGSSGPSGDVAQDLDLDDDKAIMDWDLMGLDISTAGDMWDQLVWDYDETLVT
EPEGGEEGHQQQDDVMSDLFFLDNL

Nucleotide Sequence
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GGCGACGAAAACCCCTCCAATTACG...


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